Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Mir877-201ENSMUST00000104738 85 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm12579-201ENSMUST00000118040 783 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm37597-201ENSMUST00000191853 382 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm5302-201ENSMUST00000202130 796 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm18056-201ENSMUST00000207670 568 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm18061-201ENSMUST00000208350 562 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm18063-201ENSMUST00000208529 568 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm18052-201ENSMUST00000208750 559 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.61□□□□□ -0.55
Trim60Q8VI40 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim60Q8VI40 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm13461-201ENSMUST00000120980 662 ntBASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.6□□□□□ -0.55
Trim60Q8VI40 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm12407-201ENSMUST00000180219 324 ntBASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm7003-201ENSMUST00000195089 312 ntBASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.6□□□□□ -0.55
Trim60Q8VI40 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms