Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm11956-201ENSMUST00000119525 512 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm10051-201ENSMUST00000145209 414 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm23045-201ENSMUST00000175041 96 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm23694-201ENSMUST00000179335 110 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm43058-201ENSMUST00000197645 625 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim29Q8R2Q0 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim29Q8R2Q0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms