Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Gm12247-201ENSMUST00000117585 670 ntBASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Gm15711-201ENSMUST00000118889 535 ntBASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Gm2965-201ENSMUST00000198365 343 ntBASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28aQ8CEI3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gm12380-201ENSMUST00000119012 544 ntBASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Gm5302-201ENSMUST00000202130 796 ntBASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28aQ8CEI3 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms