Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup88Q8CEC0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gm11836-201ENSMUST00000121022 441 ntBASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gm34023-201ENSMUST00000195539 217 ntBASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gm9645-201ENSMUST00000197131 792 ntBASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gm44506-201ENSMUST00000206278 965 ntBASIC13.27□□□□□ -0.29
Nup88Q8CEC0 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Gm37422-201ENSMUST00000193794 4718 ntBASIC13.27□□□□□ -0.29
Nup88Q8CEC0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup88Q8CEC0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Gm11500-201ENSMUST00000118237 601 ntBASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Gm6450-201ENSMUST00000200896 574 ntBASIC13.26□□□□□ -0.29
Nup88Q8CEC0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.26□□□□□ -0.29
Nup88Q8CEC0 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.26□□□□□ -0.29
Nup88Q8CEC0 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup88Q8CEC0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup88Q8CEC0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nup88Q8CEC0 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup88Q8CEC0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup88Q8CEC0 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nup88Q8CEC0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup88Q8CEC0 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms