Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm12501-201ENSMUST00000119163 529 ntBASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm20495-201ENSMUST00000173902 235 ntBASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Mir6979-201ENSMUST00000183927 56 ntBASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc87Q8CDL9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm12196-201ENSMUST00000120954 262 ntBASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm11450-201ENSMUST00000121144 333 ntBASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm7150-201ENSMUST00000122032 981 ntBASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm28686-201ENSMUST00000187404 609 ntBASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm3332-201ENSMUST00000189337 928 ntBASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm7848-201ENSMUST00000210739 718 ntBASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm21811-201ENSMUST00000096485 930 ntBASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms