Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm43912-201ENSMUST00000204352 538 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm2594-201ENSMUST00000214774 742 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm8255-201ENSMUST00000218693 305 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm9111-201ENSMUST00000219394 709 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sh3rf2Q8BZT2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Sh3rf2Q8BZT2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Sh3rf2Q8BZT2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Sh3rf2Q8BZT2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sh3rf2Q8BZT2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sh3rf2Q8BZT2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm12389-201ENSMUST00000117696 418 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm25951-201ENSMUST00000175330 64 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm26976-201ENSMUST00000182929 908 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm18463-201ENSMUST00000207258 474 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm18460-201ENSMUST00000208088 464 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gm10254-201ENSMUST00000052888 867 ntBASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf2Q8BZT2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm24791-201ENSMUST00000104284 131 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Snord23-201ENSMUST00000116828 109 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm13549-201ENSMUST00000118339 796 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm12783-201ENSMUST00000121425 397 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Snord55-201ENSMUST00000174939 79 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm24809-201ENSMUST00000175318 271 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 130.7 ms