Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm22937-201ENSMUST00000103954 131 ntBASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm43506-201ENSMUST00000200675 753 ntBASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm43966-201ENSMUST00000203301 612 ntBASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm7589-201ENSMUST00000085631 534 ntBASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp6nlQ80XC3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm11952-201ENSMUST00000121172 821 ntBASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm4917-201ENSMUST00000121452 650 ntBASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm43969-201ENSMUST00000204833 535 ntBASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp6nlQ80XC3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp6nlQ80XC3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms