Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm11340-201ENSMUST00000119226 412 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm9135-201ENSMUST00000182963 990 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm43380-201ENSMUST00000200421 220 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm3619-201ENSMUST00000219947 775 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm3726-201ENSMUST00000203110 785 ntBASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm44008-201ENSMUST00000204345 412 ntBASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm5805-201ENSMUST00000072779 456 ntBASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh8Q7TSK3 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms