Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Mir1982-201ENSMUST00000157368 74 ntBASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm38241-201ENSMUST00000192641 898 ntBASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm17931-201ENSMUST00000208132 634 ntBASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm11425-201ENSMUST00000119608 498 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm37597-201ENSMUST00000191853 382 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm38002-201ENSMUST00000193255 180 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm5950-201ENSMUST00000213337 772 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Gm9396-201ENSMUST00000076703 567 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf220Q6PDX6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm15610-201ENSMUST00000120584 195 ntBASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms