Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm25770-201ENSMUST00000158566 115 ntBASIC8.57□□□□□ -1.04
NipblQ6KCD5 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Gm9162-201ENSMUST00000182081 991 ntBASIC8.57□□□□□ -1.04
NipblQ6KCD5 Gm19927-201ENSMUST00000185792 781 ntBASIC8.57□□□□□ -1.04
NipblQ6KCD5 Gm31274-201ENSMUST00000197356 229 ntBASIC8.57□□□□□ -1.04
NipblQ6KCD5 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC8.57□□□□□ -1.04
NipblQ6KCD5 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm6881-201ENSMUST00000121811 833 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Olfml3-204ENSMUST00000169286 874 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Tspy-ps-203ENSMUST00000186546 989 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm37365-201ENSMUST00000193109 409 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm37819-201ENSMUST00000194626 1065 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm44124-201ENSMUST00000204159 472 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm19046-201ENSMUST00000221263 1298 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm13898-201ENSMUST00000141865 610 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm16547-201ENSMUST00000159474 293 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm25145-201ENSMUST00000177640 110 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Zkscan7-205ENSMUST00000216462 990 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 AC102847.1-202ENSMUST00000226313 1245 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm14148-201ENSMUST00000122433 1008 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm9372-201ENSMUST00000168454 430 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Mir6921-201ENSMUST00000183719 80 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Gm4753-201ENSMUST00000188327 1255 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
NipblQ6KCD5 CT010480.2-201ENSMUST00000225424 737 ntBASIC8.56□□□□□ -1.04
NipblQ6KCD5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NipblQ6KCD5 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
NipblQ6KCD5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
NipblQ6KCD5 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
NipblQ6KCD5 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NipblQ6KCD5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NipblQ6KCD5 Gm43773-201ENSMUST00000198548 2162 ntBASIC8.55□□□□□ -1.04
NipblQ6KCD5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
NipblQ6KCD5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NipblQ6KCD5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms