Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Gm43174-201ENSMUST00000195914 2445 ntBASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Gm38034-201ENSMUST00000193915 2069 ntBASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Gm44663-201ENSMUST00000206898 3150 ntBASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Gm26379-201ENSMUST00000178125 138 ntBASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Gm28179-201ENSMUST00000188365 613 ntBASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Gm5865-201ENSMUST00000198713 637 ntBASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 AC155300.1-201ENSMUST00000219134 480 ntBASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Erich3-203ENSMUST00000189969 3460 ntBASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Gm45308-201ENSMUST00000210610 415 ntBASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Gm18621-201ENSMUST00000222677 679 ntBASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Gm45776-201ENSMUST00000212366 1522 ntBASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarca2Q6DIC0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Smarca2Q6DIC0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Gm8824-201ENSMUST00000182962 990 ntBASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 CT571271.1-201ENSMUST00000227071 670 ntBASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Gm13169-201ENSMUST00000122090 1459 ntBASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Gm45165-201ENSMUST00000207763 1631 ntBASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Gm45003-201ENSMUST00000205875 2158 ntBASIC19.2■□□□□ 0.66
Smarca2Q6DIC0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm23129-201ENSMUST00000104259 132 ntBASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm17107-201ENSMUST00000170983 553 ntBASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm20474-201ENSMUST00000180089 596 ntBASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm8918-201ENSMUST00000190587 1087 ntBASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm2328-201ENSMUST00000193525 535 ntBASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm37944-201ENSMUST00000194233 414 ntBASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC19.19■□□□□ 0.66
Smarca2Q6DIC0 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms