Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm11700-201ENSMUST00000119409 403 ntBASIC14.36□□□□□ -0.11
Clcn1Q64347 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Gm24328-201ENSMUST00000175104 67 ntBASIC14.36□□□□□ -0.11
Clcn1Q64347 Mir7035-201ENSMUST00000184713 82 ntBASIC14.36□□□□□ -0.11
Clcn1Q64347 Gm42430-201ENSMUST00000197209 616 ntBASIC14.36□□□□□ -0.11
Clcn1Q64347 Gm9520-201ENSMUST00000209460 1253 ntBASIC14.36□□□□□ -0.11
Clcn1Q64347 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Gm40879-201ENSMUST00000220759 612 ntBASIC14.36□□□□□ -0.11
Clcn1Q64347 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Clcn1Q64347 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.36□□□□□ -0.11
Clcn1Q64347 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clcn1Q64347 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn1Q64347 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.35□□□□□ -0.11
Clcn1Q64347 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.35□□□□□ -0.11
Clcn1Q64347 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Gm17214-201ENSMUST00000164501 541 ntBASIC14.35□□□□□ -0.11
Clcn1Q64347 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC14.35□□□□□ -0.11
Clcn1Q64347 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn1Q64347 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn1Q64347 CT009754.4-201ENSMUST00000221430 565 ntBASIC14.35□□□□□ -0.11
Clcn1Q64347 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn1Q64347 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn1Q64347 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC14.34□□□□□ -0.11
Clcn1Q64347 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.34□□□□□ -0.11
Clcn1Q64347 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clcn1Q64347 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm18801-201ENSMUST00000186616 536 ntBASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm29763-201ENSMUST00000205306 616 ntBASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm18065-201ENSMUST00000221395 526 ntBASIC14.34□□□□□ -0.11
Clcn1Q64347 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm37580-201ENSMUST00000192408 2800 ntBASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clcn1Q64347 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn1Q64347 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clcn1Q64347 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clcn1Q64347 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Clcn1Q64347 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clcn1Q64347 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clcn1Q64347 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms