Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
ClpbQ60649 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
ClpbQ60649 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.81□□□□□ -0.68
ClpbQ60649 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
ClpbQ60649 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm11949-201ENSMUST00000117640 372 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Gm9089-201ENSMUST00000122027 526 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm8459-201ENSMUST00000162504 760 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.81□□□□□ -0.68
ClpbQ60649 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.81□□□□□ -0.68
ClpbQ60649 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.81□□□□□ -0.68
ClpbQ60649 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClpbQ60649 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ClpbQ60649 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.8□□□□□ -0.68
ClpbQ60649 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.8□□□□□ -0.68
ClpbQ60649 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
ClpbQ60649 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm14460-201ENSMUST00000121511 639 ntBASIC10.8□□□□□ -0.68
ClpbQ60649 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.8□□□□□ -0.68
ClpbQ60649 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
ClpbQ60649 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.8□□□□□ -0.68
ClpbQ60649 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.8□□□□□ -0.68
ClpbQ60649 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
ClpbQ60649 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm37981-201ENSMUST00000194280 535 ntBASIC10.8□□□□□ -0.68
ClpbQ60649 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm9645-201ENSMUST00000197131 792 ntBASIC10.8□□□□□ -0.68
ClpbQ60649 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm8342-201ENSMUST00000209839 757 ntBASIC10.8□□□□□ -0.68
ClpbQ60649 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.8□□□□□ -0.68
ClpbQ60649 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.8□□□□□ -0.68
ClpbQ60649 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
ClpbQ60649 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
ClpbQ60649 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.8□□□□□ -0.68
ClpbQ60649 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.8□□□□□ -0.68
ClpbQ60649 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms