Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Gm24992-201ENSMUST00000157412 130 ntBASIC12.77□□□□□ -0.37
Gm28047Q3US59 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.77□□□□□ -0.37
Gm28047Q3US59 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.77□□□□□ -0.37
Gm28047Q3US59 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.77□□□□□ -0.37
Gm28047Q3US59 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.77□□□□□ -0.37
Gm28047Q3US59 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gm28047Q3US59 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.77□□□□□ -0.37
Gm28047Q3US59 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm15236-201ENSMUST00000117309 379 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm4909-201ENSMUST00000118749 794 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm8302-201ENSMUST00000119217 852 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm22144-201ENSMUST00000157402 102 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Gm5363-201ENSMUST00000211927 938 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.76□□□□□ -0.37
Gm28047Q3US59 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm28047Q3US59 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm28047Q3US59 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Gm12165-201ENSMUST00000117047 342 ntBASIC12.75□□□□□ -0.37
Gm28047Q3US59 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.75□□□□□ -0.37
Gm28047Q3US59 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm28047Q3US59 Gm29199-201ENSMUST00000187766 775 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms