Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Znf48Q3US17 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Znf48Q3US17 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Znf48Q3US17 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Znf48Q3US17 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Znf48Q3US17 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Znf48Q3US17 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Znf48Q3US17 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Znf48Q3US17 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Znf48Q3US17 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Znf48Q3US17 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.65□□□□□ -0.87
Znf48Q3US17 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm12795-201ENSMUST00000117594 539 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm13460-201ENSMUST00000121274 353 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm5616-201ENSMUST00000165252 384 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm8741-201ENSMUST00000174736 384 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm18799-201ENSMUST00000189104 913 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm21301-201ENSMUST00000189476 699 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm6140-201ENSMUST00000192494 966 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm37809-201ENSMUST00000195050 931 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.64□□□□□ -0.87
Znf48Q3US17 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Znf48Q3US17 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Znf48Q3US17 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.63□□□□□ -0.87
Znf48Q3US17 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Znf48Q3US17 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.63□□□□□ -0.87
Znf48Q3US17 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Znf48Q3US17 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms