Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm8111-201ENSMUST00000117659 987 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm15782-201ENSMUST00000121073 445 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Mir7051-201ENSMUST00000184167 73 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm37319-201ENSMUST00000193500 636 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm37028-201ENSMUST00000194276 107 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm43058-201ENSMUST00000197645 625 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm18561-201ENSMUST00000206027 804 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.82□□□□□ -0.52
Cntn3Q07409 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn3Q07409 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cntn3Q07409 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm25148-201ENSMUST00000104611 123 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm15528-201ENSMUST00000117821 864 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm3329-201ENSMUST00000159873 556 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Mir6407-201ENSMUST00000184510 101 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm43163-201ENSMUST00000196571 442 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.81□□□□□ -0.52
Cntn3Q07409 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.81□□□□□ -0.52
Cntn3Q07409 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cntn3Q07409 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cntn3Q07409 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.8□□□□□ -0.52
Cntn3Q07409 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cntn3Q07409 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.8□□□□□ -0.52
Cntn3Q07409 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Cntn3Q07409 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cntn3Q07409 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms