Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Mir432-201ENSMUST00000157230 75 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm28671-201ENSMUST00000187036 692 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm18351-201ENSMUST00000188646 883 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm7238-201ENSMUST00000206467 973 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 AC164556.1-201ENSMUST00000221318 751 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-3P97334 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-3P97334 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Nkx2-3P97334 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-3P97334 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
Nkx2-3P97334 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-3P97334 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-3P97334 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Gm45124-201ENSMUST00000206723 2755 ntBASIC14.08□□□□□ -0.16
Nkx2-3P97334 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Gm14005-208ENSMUST00000223654 681 ntBASIC14.08□□□□□ -0.16
Nkx2-3P97334 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.08□□□□□ -0.16
Nkx2-3P97334 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-3P97334 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Gm23745-201ENSMUST00000104230 125 ntBASIC14.07□□□□□ -0.16
Nkx2-3P97334 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.07□□□□□ -0.16
Nkx2-3P97334 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Gm6478-201ENSMUST00000099450 742 ntBASIC14.07□□□□□ -0.16
Nkx2-3P97334 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-3P97334 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-3P97334 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms