Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.18□□□□□ -0.46
CiitaP79621 Gm10020-201ENSMUST00000081993 612 ntBASIC12.18□□□□□ -0.46
CiitaP79621 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CiitaP79621 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.18□□□□□ -0.46
CiitaP79621 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CiitaP79621 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CiitaP79621 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CiitaP79621 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CiitaP79621 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CiitaP79621 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CiitaP79621 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.18□□□□□ -0.46
CiitaP79621 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CiitaP79621 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CiitaP79621 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CiitaP79621 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CiitaP79621 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CiitaP79621 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.18□□□□□ -0.46
CiitaP79621 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.17□□□□□ -0.46
CiitaP79621 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
CiitaP79621 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Gm11675-201ENSMUST00000121873 832 ntBASIC12.17□□□□□ -0.46
CiitaP79621 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CiitaP79621 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.17□□□□□ -0.46
CiitaP79621 Gm28833-201ENSMUST00000189671 559 ntBASIC12.17□□□□□ -0.46
CiitaP79621 Gm19587-201ENSMUST00000191395 545 ntBASIC12.17□□□□□ -0.46
CiitaP79621 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.17□□□□□ -0.46
CiitaP79621 Gm43671-201ENSMUST00000200422 433 ntBASIC12.17□□□□□ -0.46
CiitaP79621 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CiitaP79621 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.17□□□□□ -0.46
CiitaP79621 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CiitaP79621 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CiitaP79621 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CiitaP79621 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
CiitaP79621 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CiitaP79621 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CiitaP79621 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.16□□□□□ -0.46
CiitaP79621 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CiitaP79621 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Mir453-201ENSMUST00000104732 82 ntBASIC12.16□□□□□ -0.46
CiitaP79621 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.16□□□□□ -0.46
CiitaP79621 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.16□□□□□ -0.46
CiitaP79621 Gm14497-201ENSMUST00000119537 580 ntBASIC12.16□□□□□ -0.46
CiitaP79621 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.16□□□□□ -0.46
CiitaP79621 Snord55-201ENSMUST00000174939 79 ntBASIC12.16□□□□□ -0.46
CiitaP79621 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CiitaP79621 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.16□□□□□ -0.46
CiitaP79621 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
CiitaP79621 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.16□□□□□ -0.46
CiitaP79621 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.16□□□□□ -0.46
CiitaP79621 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms