Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.04□□□□□ -0.64
Shox2P70390 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Gm37567-201ENSMUST00000193241 2279 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.04□□□□□ -0.64
Shox2P70390 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Gm4986-201ENSMUST00000119731 549 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.04□□□□□ -0.64
Shox2P70390 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.04□□□□□ -0.64
Shox2P70390 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Gm27437-201ENSMUST00000183429 107 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Gm27839-201ENSMUST00000184242 106 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Shox2P70390 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Gm4978-201ENSMUST00000071565 801 ntBASIC11.04□□□□□ -0.64
Shox2P70390 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Shox2P70390 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Shox2P70390 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shox2P70390 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Shox2P70390 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.03□□□□□ -0.64
Shox2P70390 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC11.03□□□□□ -0.64
Shox2P70390 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Shox2P70390 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.03□□□□□ -0.64
Shox2P70390 Gm6722-201ENSMUST00000221586 390 ntBASIC11.03□□□□□ -0.64
Shox2P70390 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.03□□□□□ -0.64
Shox2P70390 Gm25125-201ENSMUST00000083340 136 ntBASIC11.03□□□□□ -0.64
Shox2P70390 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.03□□□□□ -0.64
Shox2P70390 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC11.03□□□□□ -0.64
Shox2P70390 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Gm42741-201ENSMUST00000201340 2278 ntBASIC11.03□□□□□ -0.64
Shox2P70390 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.03□□□□□ -0.64
Shox2P70390 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.03□□□□□ -0.64
Shox2P70390 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shox2P70390 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC11.03□□□□□ -0.64
Shox2P70390 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shox2P70390 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Shox2P70390 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shox2P70390 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.02□□□□□ -0.64
Shox2P70390 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Shox2P70390 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shox2P70390 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.02□□□□□ -0.65
Shox2P70390 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shox2P70390 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Shox2P70390 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shox2P70390 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shox2P70390 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shox2P70390 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.02□□□□□ -0.65
Shox2P70390 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Shox2P70390 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.02□□□□□ -0.65
Shox2P70390 Gm26047-201ENSMUST00000157308 113 ntBASIC11.02□□□□□ -0.65
Shox2P70390 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.02□□□□□ -0.65
Shox2P70390 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.02□□□□□ -0.65
Shox2P70390 Gm26047-202ENSMUST00000198840 115 ntBASIC11.02□□□□□ -0.65
Shox2P70390 Gm45856-201ENSMUST00000212752 416 ntBASIC11.02□□□□□ -0.65
Shox2P70390 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms