Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm43488-201ENSMUST00000198874 2504 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm15515-201ENSMUST00000117827 822 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Hmgb1P63158 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm12407-201ENSMUST00000180219 324 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm9540-201ENSMUST00000188230 478 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm38123-201ENSMUST00000194990 2779 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 AU022133-201ENSMUST00000200601 873 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm5996-201ENSMUST00000211110 718 ntBASIC12.41□□□□□ -0.42
Hmgb1P63158 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hmgb1P63158 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgb1P63158 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgb1P63158 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Gm15566-201ENSMUST00000121130 590 ntBASIC12.4□□□□□ -0.42
Hmgb1P63158 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms