Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ybx1P62960 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.53□□□□□ -0.56
Ybx1P62960 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.53□□□□□ -0.56
Ybx1P62960 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.53□□□□□ -0.56
Ybx1P62960 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ybx1P62960 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Ybx1P62960 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.53□□□□□ -0.56
Ybx1P62960 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ybx1P62960 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.53□□□□□ -0.56
Ybx1P62960 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.52□□□□□ -0.56
Ybx1P62960 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ybx1P62960 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.52□□□□□ -0.56
Ybx1P62960 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.52□□□□□ -0.56
Ybx1P62960 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ybx1P62960 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ybx1P62960 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ybx1P62960 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ybx1P62960 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ybx1P62960 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.52□□□□□ -0.56
Ybx1P62960 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Ybx1P62960 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.52□□□□□ -0.57
Ybx1P62960 Gm15617-201ENSMUST00000118973 771 ntBASIC11.52□□□□□ -0.57
Ybx1P62960 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.52□□□□□ -0.57
Ybx1P62960 Gm9507-202ENSMUST00000180157 654 ntBASIC11.52□□□□□ -0.57
Ybx1P62960 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.52□□□□□ -0.57
Ybx1P62960 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.52□□□□□ -0.57
Ybx1P62960 Gm43506-201ENSMUST00000200675 753 ntBASIC11.52□□□□□ -0.57
Ybx1P62960 Gm45085-201ENSMUST00000209100 441 ntBASIC11.52□□□□□ -0.57
Ybx1P62960 Gm18035-201ENSMUST00000211962 589 ntBASIC11.52□□□□□ -0.57
Ybx1P62960 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.52□□□□□ -0.57
Ybx1P62960 Lect2-202ENSMUST00000225183 823 ntBASIC11.52□□□□□ -0.57
Ybx1P62960 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ybx1P62960 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ybx1P62960 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ybx1P62960 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Ybx1P62960 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ybx1P62960 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ybx1P62960 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ybx1P62960 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ybx1P62960 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Erich3-203ENSMUST00000189969 3460 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Ybx1P62960 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.51□□□□□ -0.57
Ybx1P62960 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ybx1P62960 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ybx1P62960 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Gm6158-201ENSMUST00000109467 904 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Gm14234-201ENSMUST00000119539 845 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.51□□□□□ -0.57
Ybx1P62960 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.51□□□□□ -0.57
Ybx1P62960 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.51□□□□□ -0.57
Ybx1P62960 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ybx1P62960 Gm23400-201ENSMUST00000174994 102 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Gm26463-201ENSMUST00000175065 101 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Gm24332-201ENSMUST00000175102 102 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Gm25959-201ENSMUST00000175112 102 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Gm22475-201ENSMUST00000175169 102 ntBASIC11.51□□□□□ -0.57
Ybx1P62960 Gm22903-201ENSMUST00000175193 102 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms