Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LmnaP48678 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.89□□□□□ -0.51
LmnaP48678 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LmnaP48678 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.88□□□□□ -0.51
LmnaP48678 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LmnaP48678 Gm6630-201ENSMUST00000119199 454 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.88□□□□□ -0.51
LmnaP48678 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LmnaP48678 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC11.88□□□□□ -0.51
LmnaP48678 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LmnaP48678 Gm29410-201ENSMUST00000188383 694 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Gm37002-201ENSMUST00000194560 373 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Gm37973-201ENSMUST00000195767 1289 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.88□□□□□ -0.51
LmnaP48678 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.88□□□□□ -0.51
LmnaP48678 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.88□□□□□ -0.51
LmnaP48678 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.88□□□□□ -0.51
LmnaP48678 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LmnaP48678 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LmnaP48678 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LmnaP48678 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LmnaP48678 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LmnaP48678 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
LmnaP48678 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.88□□□□□ -0.51
LmnaP48678 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LmnaP48678 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LmnaP48678 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LmnaP48678 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LmnaP48678 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.87□□□□□ -0.51
LmnaP48678 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LmnaP48678 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.87□□□□□ -0.51
LmnaP48678 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.87□□□□□ -0.51
LmnaP48678 Gm13255-201ENSMUST00000117255 547 ntBASIC11.87□□□□□ -0.51
LmnaP48678 Gm11652-201ENSMUST00000117842 1267 ntBASIC11.87□□□□□ -0.51
LmnaP48678 Gm13740-201ENSMUST00000120590 310 ntBASIC11.87□□□□□ -0.51
LmnaP48678 Gm12372-201ENSMUST00000121654 768 ntBASIC11.87□□□□□ -0.51
LmnaP48678 Gm24380-201ENSMUST00000122696 324 ntBASIC11.87□□□□□ -0.51
LmnaP48678 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.87□□□□□ -0.51
LmnaP48678 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
LmnaP48678 Gm37751-201ENSMUST00000192440 1198 ntBASIC11.87□□□□□ -0.51
LmnaP48678 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.87□□□□□ -0.51
LmnaP48678 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.87□□□□□ -0.51
LmnaP48678 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LmnaP48678 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms