Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Gm24891-201ENSMUST00000104391 136 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Gm12501-201ENSMUST00000119163 529 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Gm14208-201ENSMUST00000119645 678 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Gm14277-201ENSMUST00000121195 360 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.16□□□□□ -0.78
Rfx3P48381 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Rfx3P48381 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm23085-201ENSMUST00000157849 293 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm17040-202ENSMUST00000170597 889 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Rfx3P48381 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm45113-201ENSMUST00000207518 165 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.16□□□□□ -0.78
Rfx3P48381 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Rfx3P48381 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.16□□□□□ -0.78
Rfx3P48381 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rfx3P48381 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rfx3P48381 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Rfx3P48381 Mir7070-201ENSMUST00000183657 86 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 Gm2260-201ENSMUST00000184965 657 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Gm38151-201ENSMUST00000195085 289 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 Gm6108-201ENSMUST00000208365 367 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Gm6867-201ENSMUST00000219165 425 ntBASIC10.15□□□□□ -0.78
Rfx3P48381 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Rfx3P48381 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.15□□□□□ -0.78
Rfx3P48381 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rfx3P48381 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms