Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm22146-201ENSMUST00000157397 288 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm24992-201ENSMUST00000157412 130 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm8451-201ENSMUST00000170338 447 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm43671-201ENSMUST00000200422 433 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm6423-201ENSMUST00000204315 934 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Mt1-202ENSMUST00000211807 1085 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm7536-201ENSMUST00000077389 444 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm5453-201ENSMUST00000080866 447 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.66□□□□□ -0.7
Nkx2-6P43688 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-6P43688 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-6P43688 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm12783-201ENSMUST00000121425 397 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm18776-201ENSMUST00000188833 654 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm43966-201ENSMUST00000203301 612 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm6722-201ENSMUST00000221586 390 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx2-6P43688 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.65□□□□□ -0.7
Nkx2-6P43688 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Nkx2-6P43688 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-6P43688 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-6P43688 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-6P43688 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-6P43688 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-6P43688 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Nkx2-6P43688 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms