Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC161581.1-201ENSMUST00000228696 318 ntBASIC11.54□□□□□ -0.56
HttP42859 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
HttP42859 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.54□□□□□ -0.56
HttP42859 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC11.53□□□□□ -0.56
HttP42859 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC11.53□□□□□ -0.56
HttP42859 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC11.53□□□□□ -0.56
HttP42859 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
HttP42859 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.53□□□□□ -0.56
HttP42859 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC11.53□□□□□ -0.56
HttP42859 CT025642.1-201ENSMUST00000224734 1219 ntBASIC11.53□□□□□ -0.56
HttP42859 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Gm26205-201ENSMUST00000082907 134 ntBASIC11.53□□□□□ -0.56
HttP42859 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.53□□□□□ -0.56
HttP42859 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC11.53□□□□□ -0.56
HttP42859 Dcstamp-205ENSMUST00000228556 1684 ntBASIC11.53□□□□□ -0.56
HttP42859 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Gm12619-201ENSMUST00000117369 385 ntBASIC11.53□□□□□ -0.56
HttP42859 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC11.53□□□□□ -0.56
HttP42859 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC11.53□□□□□ -0.56
HttP42859 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
HttP42859 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC11.53□□□□□ -0.56
HttP42859 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
HttP42859 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.53□□□□□ -0.56
HttP42859 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
HttP42859 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC11.53□□□□□ -0.56
HttP42859 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC11.53□□□□□ -0.56
HttP42859 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC11.53□□□□□ -0.56
HttP42859 Gm22876-201ENSMUST00000175450 298 ntBASIC11.53□□□□□ -0.56
HttP42859 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.53□□□□□ -0.56
HttP42859 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.53□□□□□ -0.56
HttP42859 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HttP42859 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.52□□□□□ -0.56
HttP42859 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.52□□□□□ -0.56
HttP42859 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HttP42859 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HttP42859 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
HttP42859 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.52□□□□□ -0.56
HttP42859 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HttP42859 Gm22481-201ENSMUST00000122562 192 ntBASIC11.52□□□□□ -0.56
HttP42859 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC11.52□□□□□ -0.56
HttP42859 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.52□□□□□ -0.56
HttP42859 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HttP42859 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
HttP42859 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.52□□□□□ -0.57
HttP42859 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Gm12133-201ENSMUST00000121775 661 ntBASIC11.52□□□□□ -0.57
HttP42859 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC11.52□□□□□ -0.57
HttP42859 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
HttP42859 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.52□□□□□ -0.57
HttP42859 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.52□□□□□ -0.57
HttP42859 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC11.52□□□□□ -0.57
HttP42859 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
HttP42859 AC116797.2-203ENSMUST00000225290 565 ntBASIC11.52□□□□□ -0.57
HttP42859 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
HttP42859 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
HttP42859 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC11.51□□□□□ -0.57
HttP42859 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Gm2316-201ENSMUST00000190613 921 ntBASIC11.51□□□□□ -0.57
HttP42859 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC11.51□□□□□ -0.57
HttP42859 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 AC187103.1-202ENSMUST00000223904 1536 ntBASIC11.51□□□□□ -0.57
HttP42859 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.51□□□□□ -0.57
HttP42859 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC11.51□□□□□ -0.57
HttP42859 Gm43165-201ENSMUST00000200842 1635 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms