Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Sox6P40645 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sox6P40645 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.57□□□□□ -0.72
Sox6P40645 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Gm11663-201ENSMUST00000117888 290 ntBASIC10.57□□□□□ -0.72
Sox6P40645 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.57□□□□□ -0.72
Sox6P40645 Gm7857-201ENSMUST00000117957 358 ntBASIC10.57□□□□□ -0.72
Sox6P40645 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Sox6P40645 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.57□□□□□ -0.72
Sox6P40645 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.57□□□□□ -0.72
Sox6P40645 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.57□□□□□ -0.72
Sox6P40645 Mir6927-201ENSMUST00000184494 71 ntBASIC10.57□□□□□ -0.72
Sox6P40645 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.57□□□□□ -0.72
Sox6P40645 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.57□□□□□ -0.72
Sox6P40645 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.57□□□□□ -0.72
Sox6P40645 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.57□□□□□ -0.72
Sox6P40645 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.57□□□□□ -0.72
Sox6P40645 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sox6P40645 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sox6P40645 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sox6P40645 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox6P40645 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.56□□□□□ -0.72
Sox6P40645 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Gm14724-201ENSMUST00000118400 537 ntBASIC10.56□□□□□ -0.72
Sox6P40645 Gm15207-201ENSMUST00000119259 442 ntBASIC10.56□□□□□ -0.72
Sox6P40645 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.56□□□□□ -0.72
Sox6P40645 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.56□□□□□ -0.72
Sox6P40645 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 Gm2965-201ENSMUST00000198365 343 ntBASIC10.56□□□□□ -0.72
Sox6P40645 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.56□□□□□ -0.72
Sox6P40645 Gm10254-201ENSMUST00000052888 867 ntBASIC10.56□□□□□ -0.72
Sox6P40645 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sox6P40645 Gm21811-201ENSMUST00000096485 930 ntBASIC10.56□□□□□ -0.72
Sox6P40645 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sox6P40645 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox6P40645 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox6P40645 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.55□□□□□ -0.72
Sox6P40645 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sox6P40645 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms