Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sftpa1P35242 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Matn2-203ENSMUST00000226766 3252 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Sftpa1P35242 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm12418-201ENSMUST00000118116 942 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm15707-201ENSMUST00000118804 996 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm22344-201ENSMUST00000122642 278 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm3329-201ENSMUST00000159873 556 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm6612-201ENSMUST00000170777 395 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm44008-201ENSMUST00000204345 412 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm7904-201ENSMUST00000217049 465 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm26782-203ENSMUST00000227103 751 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Gm6564-201ENSMUST00000075377 619 ntBASIC10.4□□□□□ -0.74
Sftpa1P35242 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sftpa1P35242 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.4□□□□□ -0.74
Sftpa1P35242 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.75
Sftpa1P35242 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.4□□□□□ -0.75
Sftpa1P35242 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sftpa1P35242 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.39□□□□□ -0.75
Sftpa1P35242 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sftpa1P35242 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.39□□□□□ -0.75
Sftpa1P35242 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm2345-201ENSMUST00000193451 589 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm33707-201ENSMUST00000195135 569 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.39□□□□□ -0.75
Sftpa1P35242 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.39□□□□□ -0.75
Sftpa1P35242 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sftpa1P35242 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Sftpa1P35242 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.39□□□□□ -0.75
Sftpa1P35242 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms