Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hoxc5P32043 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.41□□□□□ -0.74
Hoxc5P32043 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm13035-201ENSMUST00000117496 342 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm12247-201ENSMUST00000117585 670 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm23085-201ENSMUST00000157849 293 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm3150-201ENSMUST00000166418 204 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
Hoxc5P32043 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm9353-201ENSMUST00000200472 604 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm7504-201ENSMUST00000201449 424 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm5996-201ENSMUST00000211110 718 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.41□□□□□ -0.74
Hoxc5P32043 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.41□□□□□ -0.74
Hoxc5P32043 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hoxc5P32043 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxc5P32043 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.4□□□□□ -0.74
Hoxc5P32043 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm7851-201ENSMUST00000117574 323 ntBASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm15595-201ENSMUST00000120840 961 ntBASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm11450-201ENSMUST00000121144 333 ntBASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm15329-201ENSMUST00000121408 155 ntBASIC10.4□□□□□ -0.74
Hoxc5P32043 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.4□□□□□ -0.74
Hoxc5P32043 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hoxc5P32043 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Ntng1-201ENSMUST00000051253 327 ntBASIC10.4□□□□□ -0.74
Hoxc5P32043 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxc5P32043 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxc5P32043 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxc5P32043 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxc5P32043 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms