Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SnrpbP27048 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
SnrpbP27048 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.28□□□□□ -0.76
SnrpbP27048 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Gm4984-201ENSMUST00000115987 360 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Gm13570-201ENSMUST00000140763 309 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.28□□□□□ -0.76
SnrpbP27048 Gm22698-201ENSMUST00000175375 108 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Mir6977-201ENSMUST00000184960 64 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.28□□□□□ -0.76
SnrpbP27048 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Gm37989-201ENSMUST00000195202 803 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Gm43947-201ENSMUST00000203019 959 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SnrpbP27048 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.28□□□□□ -0.76
SnrpbP27048 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SnrpbP27048 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
SnrpbP27048 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.28□□□□□ -0.76
SnrpbP27048 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SnrpbP27048 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SnrpbP27048 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SnrpbP27048 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SnrpbP27048 AC132384.4-201ENSMUST00000220343 1397 ntBASIC10.27□□□□□ -0.76
SnrpbP27048 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SnrpbP27048 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
SnrpbP27048 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SnrpbP27048 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
SnrpbP27048 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SnrpbP27048 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
SnrpbP27048 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SnrpbP27048 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.27□□□□□ -0.77
SnrpbP27048 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC10.27□□□□□ -0.77
SnrpbP27048 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.27□□□□□ -0.77
SnrpbP27048 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.27□□□□□ -0.77
SnrpbP27048 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
SnrpbP27048 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC10.27□□□□□ -0.77
SnrpbP27048 Gm28929-201ENSMUST00000185330 1193 ntBASIC10.27□□□□□ -0.77
SnrpbP27048 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Gm43629-201ENSMUST00000201782 704 ntBASIC10.27□□□□□ -0.77
SnrpbP27048 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.27□□□□□ -0.77
SnrpbP27048 Gm44889-201ENSMUST00000207674 1019 ntTSL 5 BASIC10.27□□□□□ -0.77
SnrpbP27048 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC10.27□□□□□ -0.77
SnrpbP27048 Gm9908-201ENSMUST00000211534 448 ntBASIC10.27□□□□□ -0.77
SnrpbP27048 Gm17794-201ENSMUST00000220252 955 ntBASIC10.27□□□□□ -0.77
SnrpbP27048 Lect2-202ENSMUST00000225183 823 ntBASIC10.27□□□□□ -0.77
SnrpbP27048 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SnrpbP27048 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Gm6180-201ENSMUST00000065243 498 ntBASIC10.27□□□□□ -0.77
SnrpbP27048 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SnrpbP27048 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
SnrpbP27048 Rpl31-201ENSMUST00000086535 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SnrpbP27048 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms