Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Tnfrsf1aP25118 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tnfrsf1aP25118 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm14028-201ENSMUST00000117434 479 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm27341-201ENSMUST00000183570 106 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm9353-201ENSMUST00000200472 604 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tnfrsf1aP25118 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm13809-201ENSMUST00000117921 597 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm8731-201ENSMUST00000118088 412 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm11450-201ENSMUST00000121144 333 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm12407-201ENSMUST00000180219 324 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm7741-201ENSMUST00000181445 989 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm27552-201ENSMUST00000183351 62 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Gm27844-201ENSMUST00000183613 62 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 AU022133-201ENSMUST00000200601 873 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tnfrsf1aP25118 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms