Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Tnfrsf9P20334 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Tnfrsf9P20334 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tnfrsf9P20334 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tnfrsf9P20334 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tnfrsf9P20334 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm23596-201ENSMUST00000104304 132 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm12314-201ENSMUST00000118104 538 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm27039-201ENSMUST00000182438 962 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm27427-201ENSMUST00000185134 193 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm6905-201ENSMUST00000205729 511 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm19189-201ENSMUST00000221689 754 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tnfrsf9P20334 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.53□□□□□ -0.88
Tnfrsf9P20334 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms