Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
VimP20152 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
VimP20152 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.33□□□□□ -0.6
VimP20152 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.33□□□□□ -0.6
VimP20152 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.33□□□□□ -0.6
VimP20152 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
VimP20152 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
VimP20152 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
VimP20152 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.32□□□□□ -0.6
VimP20152 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC11.32□□□□□ -0.6
VimP20152 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.32□□□□□ -0.6
VimP20152 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
VimP20152 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.32□□□□□ -0.6
VimP20152 Gm16177-201ENSMUST00000120728 718 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
VimP20152 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
VimP20152 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.32□□□□□ -0.6
VimP20152 Gm2546-201ENSMUST00000182630 991 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.32□□□□□ -0.6
VimP20152 Gm28937-201ENSMUST00000185413 695 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm29400-201ENSMUST00000187208 695 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm28662-201ENSMUST00000188446 695 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm28251-201ENSMUST00000188835 695 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm37318-201ENSMUST00000194325 695 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm38017-201ENSMUST00000194768 695 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm37287-201ENSMUST00000195449 695 ntBASIC11.32□□□□□ -0.6
VimP20152 Gm37793-201ENSMUST00000195548 695 ntBASIC11.32□□□□□ -0.6
VimP20152 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.32□□□□□ -0.6
VimP20152 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.32□□□□□ -0.6
VimP20152 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.32□□□□□ -0.6
VimP20152 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.32□□□□□ -0.6
VimP20152 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VimP20152 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.32□□□□□ -0.6
VimP20152 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.32□□□□□ -0.6
VimP20152 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
VimP20152 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.31□□□□□ -0.6
VimP20152 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
VimP20152 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.31□□□□□ -0.6
VimP20152 Gm15004-201ENSMUST00000119192 630 ntBASIC11.31□□□□□ -0.6
VimP20152 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.31□□□□□ -0.6
VimP20152 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.31□□□□□ -0.6
VimP20152 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.31□□□□□ -0.6
VimP20152 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.31□□□□□ -0.6
VimP20152 Mir8093-201ENSMUST00000185043 137 ntBASIC11.31□□□□□ -0.6
VimP20152 Gm5982-201ENSMUST00000196234 512 ntBASIC11.31□□□□□ -0.6
VimP20152 Gm8956-201ENSMUST00000203939 825 ntBASIC11.31□□□□□ -0.6
VimP20152 Gm44008-201ENSMUST00000204345 412 ntBASIC11.31□□□□□ -0.6
VimP20152 Gm4607-201ENSMUST00000206649 577 ntBASIC11.31□□□□□ -0.6
VimP20152 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.31□□□□□ -0.6
VimP20152 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
VimP20152 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.31□□□□□ -0.6
VimP20152 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.31□□□□□ -0.6
VimP20152 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VimP20152 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.31□□□□□ -0.6
VimP20152 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms