Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Itgb3O54890 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.91□□□□□ -0.5
Itgb3O54890 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Itgb3O54890 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Itgb3O54890 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.9□□□□□ -0.5
Itgb3O54890 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Itgb3O54890 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Itgb3O54890 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.9□□□□□ -0.5
Itgb3O54890 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Gm12463-201ENSMUST00000118271 849 ntBASIC11.9□□□□□ -0.5
Itgb3O54890 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.9□□□□□ -0.5
Itgb3O54890 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Itgb3O54890 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.9□□□□□ -0.5
Itgb3O54890 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Itgb3O54890 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.9□□□□□ -0.5
Itgb3O54890 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.9□□□□□ -0.5
Itgb3O54890 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Gm3726-201ENSMUST00000203110 785 ntBASIC11.9□□□□□ -0.5
Itgb3O54890 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.9□□□□□ -0.5
Itgb3O54890 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Itgb3O54890 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Itgb3O54890 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Itgb3O54890 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Itgb3O54890 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Itgb3O54890 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Itgb3O54890 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Itgb3O54890 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.89□□□□□ -0.51
Itgb3O54890 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Itgb3O54890 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.89□□□□□ -0.51
Itgb3O54890 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
Itgb3O54890 Gm14807-201ENSMUST00000116640 983 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.89□□□□□ -0.51
Itgb3O54890 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Itgb3O54890 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Gm9369-201ENSMUST00000196009 733 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Gm3793-201ENSMUST00000204973 672 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.89□□□□□ -0.51
Itgb3O54890 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.89□□□□□ -0.51
Itgb3O54890 Gm3619-201ENSMUST00000219947 775 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Itgb3O54890 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.89□□□□□ -0.51
Itgb3O54890 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Itgb3O54890 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Itgb3O54890 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms