Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Scaf11E9PZM7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm5739-201ENSMUST00000208601 1703 ntBASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm5071-201ENSMUST00000104922 1035 ntBASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm7781-201ENSMUST00000117258 788 ntBASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm15476-201ENSMUST00000118247 1191 ntBASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 CT009550.1-201ENSMUST00000225750 864 ntBASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scaf11E9PZM7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm17799-201ENSMUST00000183270 667 ntBASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm9353-201ENSMUST00000200472 604 ntBASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm42867-201ENSMUST00000202995 469 ntBASIC15.48■□□□□ 0.07
Scaf11E9PZM7 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Matn2-203ENSMUST00000226766 3252 ntBASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm45124-201ENSMUST00000206723 2755 ntBASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scaf11E9PZM7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Snord17-201ENSMUST00000104526 238 ntBASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Mir1893-201ENSMUST00000122565 83 ntBASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Gm42859-201ENSMUST00000199572 193 ntBASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 CT571271.1-201ENSMUST00000227071 670 ntBASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Gm7642-201ENSMUST00000216345 1809 ntBASIC15.47■□□□□ 0.07
Scaf11E9PZM7 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC15.46■□□□□ 0.07
Scaf11E9PZM7 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scaf11E9PZM7 Gm25154-201ENSMUST00000157123 119 ntBASIC15.46■□□□□ 0.07
Scaf11E9PZM7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Scaf11E9PZM7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms