Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm21778-201ENSMUST00000178779 471 ntBASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.95□□□□□ -0.66
Cdh17Q9R100 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.94□□□□□ -0.66
Cdh17Q9R100 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.94□□□□□ -0.66
Cdh17Q9R100 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Mir877-201ENSMUST00000104738 85 ntBASIC10.94□□□□□ -0.66
Cdh17Q9R100 Gm11244-201ENSMUST00000121243 237 ntBASIC10.94□□□□□ -0.66
Cdh17Q9R100 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.94□□□□□ -0.66
Cdh17Q9R100 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.94□□□□□ -0.66
Cdh17Q9R100 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.94□□□□□ -0.66
Cdh17Q9R100 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh17Q9R100 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdh17Q9R100 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.93□□□□□ -0.66
Cdh17Q9R100 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm23200-201ENSMUST00000104379 132 ntBASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm14193-201ENSMUST00000105067 153 ntBASIC10.93□□□□□ -0.66
Cdh17Q9R100 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm29067-201ENSMUST00000190821 470 ntBASIC10.93□□□□□ -0.66
Cdh17Q9R100 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm6905-201ENSMUST00000205729 511 ntBASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 232.2 ms