Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.16□□□□□ -0.3
Scn11aQ9R053 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Gm12950-201ENSMUST00000121683 417 ntBASIC13.16□□□□□ -0.3
Scn11aQ9R053 Gm28746-201ENSMUST00000187453 380 ntBASIC13.16□□□□□ -0.3
Scn11aQ9R053 Gm38103-201ENSMUST00000191707 864 ntBASIC13.16□□□□□ -0.3
Scn11aQ9R053 Gm43811-201ENSMUST00000202862 695 ntBASIC13.16□□□□□ -0.3
Scn11aQ9R053 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 AC154407.1-201ENSMUST00000226777 526 ntBASIC13.16□□□□□ -0.3
Scn11aQ9R053 AC137871.1-201ENSMUST00000228278 475 ntBASIC13.16□□□□□ -0.3
Scn11aQ9R053 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scn11aQ9R053 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.16□□□□□ -0.3
Scn11aQ9R053 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn11aQ9R053 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn11aQ9R053 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.15□□□□□ -0.3
Scn11aQ9R053 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Gm42751-201ENSMUST00000198065 559 ntBASIC13.15□□□□□ -0.3
Scn11aQ9R053 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn11aQ9R053 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC13.15□□□□□ -0.3
Scn11aQ9R053 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.15□□□□□ -0.3
Scn11aQ9R053 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn11aQ9R053 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 AC166361.2-201ENSMUST00000219269 1415 ntBASIC13.15□□□□□ -0.3
Scn11aQ9R053 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn11aQ9R053 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.15□□□□□ -0.31
Scn11aQ9R053 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn11aQ9R053 Gm23132-201ENSMUST00000104254 132 ntBASIC13.15□□□□□ -0.31
Scn11aQ9R053 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn11aQ9R053 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Scn11aQ9R053 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.15□□□□□ -0.31
Scn11aQ9R053 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Scn11aQ9R053 Gm19918-201ENSMUST00000194858 400 ntBASIC13.15□□□□□ -0.31
Scn11aQ9R053 Gm18001-201ENSMUST00000212023 688 ntBASIC13.15□□□□□ -0.31
Scn11aQ9R053 AC164099.1-201ENSMUST00000227780 333 ntBASIC13.15□□□□□ -0.31
Scn11aQ9R053 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC13.15□□□□□ -0.31
Scn11aQ9R053 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC13.15□□□□□ -0.31
Scn11aQ9R053 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Gm38192-201ENSMUST00000194364 1847 ntBASIC13.14□□□□□ -0.31
Scn11aQ9R053 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Gm8601-201ENSMUST00000182096 909 ntBASIC13.14□□□□□ -0.31
Scn11aQ9R053 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scn11aQ9R053 CT030195.2-201ENSMUST00000226074 1286 ntBASIC13.14□□□□□ -0.31
Scn11aQ9R053 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn11aQ9R053 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.13□□□□□ -0.31
Scn11aQ9R053 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms