Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm16071-201ENSMUST00000119589 793 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm7150-201ENSMUST00000122032 981 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm24844-201ENSMUST00000158679 127 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm17826-201ENSMUST00000189720 798 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm43058-201ENSMUST00000197645 625 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.49□□□□□ -0.73
Cdc40Q9DC48 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdc40Q9DC48 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm25076-201ENSMUST00000104098 132 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm14071-201ENSMUST00000117817 509 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm3329-201ENSMUST00000159873 556 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm18367-201ENSMUST00000176139 600 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm10731-201ENSMUST00000181171 448 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Mir6958-201ENSMUST00000184207 73 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm3551-201ENSMUST00000190750 664 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm44329-201ENSMUST00000197469 112 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdc40Q9DC48 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms