Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm3551-201ENSMUST00000190750 664 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm37905-201ENSMUST00000195310 341 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm37826-201ENSMUST00000195329 322 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm9463-201ENSMUST00000206707 601 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm10179-201ENSMUST00000086233 688 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Mir7051-201ENSMUST00000184167 73 ntBASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm9353-201ENSMUST00000200472 604 ntBASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm5468-202ENSMUST00000227851 682 ntBASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm8420-201ENSMUST00000097103 598 ntBASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2aQ9DB34 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Gm15617-201ENSMUST00000118973 771 ntBASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.72□□□□□ -0.53
Chmp2aQ9DB34 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms