Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Gm18065-201ENSMUST00000221395 526 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.3□□□□□ -0.6
Sf3a3Q9D554 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Gm5950-201ENSMUST00000213337 772 ntBASIC11.29□□□□□ -0.6
Sf3a3Q9D554 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.29□□□□□ -0.6
Sf3a3Q9D554 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3a3Q9D554 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.28□□□□□ -0.6
Sf3a3Q9D554 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.28□□□□□ -0.6
Sf3a3Q9D554 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Gm25214-201ENSMUST00000104573 129 ntBASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Gm11531-201ENSMUST00000117614 555 ntBASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Gm15004-201ENSMUST00000119192 630 ntBASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms