Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm14571-201ENSMUST00000118292 570 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm14370-201ENSMUST00000122460 868 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm15273-201ENSMUST00000142302 868 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm7023-201ENSMUST00000147295 868 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm14357-201ENSMUST00000178352 868 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm14361-201ENSMUST00000178547 868 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm14348-201ENSMUST00000179183 868 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm29157-201ENSMUST00000188753 612 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm29487-201ENSMUST00000190146 256 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 AC123533.3-201ENSMUST00000228056 454 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gm26021-201ENSMUST00000158664 131 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Ighv5-1-201ENSMUST00000193324 353 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh15Q99PJ1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Gm45110-201ENSMUST00000205704 1402 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Erich3-203ENSMUST00000189969 3460 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Trav9n-1-201ENSMUST00000185224 339 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Gm9523-201ENSMUST00000199146 1159 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Gm18621-201ENSMUST00000222677 679 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 AC132881.1-201ENSMUST00000223780 1062 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 AC163646.3-201ENSMUST00000228879 772 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Gm7790-201ENSMUST00000118716 1310 ntBASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Pcdh15Q99PJ1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Gm12047-201ENSMUST00000117561 944 ntBASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Gm16518-201ENSMUST00000117960 508 ntBASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh15Q99PJ1 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms