Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.9□□□□□ -0.18
RtcbQ99LF4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.9□□□□□ -0.18
RtcbQ99LF4 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.9□□□□□ -0.18
RtcbQ99LF4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.9□□□□□ -0.18
RtcbQ99LF4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Gm5808-201ENSMUST00000178090 357 ntBASIC13.9□□□□□ -0.18
RtcbQ99LF4 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC13.9□□□□□ -0.18
RtcbQ99LF4 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RtcbQ99LF4 AC154354.1-203ENSMUST00000225565 1364 ntBASIC13.9□□□□□ -0.18
RtcbQ99LF4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RtcbQ99LF4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RtcbQ99LF4 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RtcbQ99LF4 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RtcbQ99LF4 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RtcbQ99LF4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm23439-201ENSMUST00000104292 132 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Snord17-201ENSMUST00000104526 238 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm24294-201ENSMUST00000158295 277 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Mir6359-201ENSMUST00000183668 81 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Ighv1-70-201ENSMUST00000196509 351 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm44498-201ENSMUST00000199509 111 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm45258-201ENSMUST00000210042 853 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Lect2-202ENSMUST00000225183 823 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 AC187103.3-201ENSMUST00000225725 646 ntBASIC13.89□□□□□ -0.19
RtcbQ99LF4 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RtcbQ99LF4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RtcbQ99LF4 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RtcbQ99LF4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RtcbQ99LF4 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.88□□□□□ -0.19
RtcbQ99LF4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RtcbQ99LF4 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RtcbQ99LF4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RtcbQ99LF4 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RtcbQ99LF4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms