Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm22616-201ENSMUST00000179783 100 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm8918-201ENSMUST00000190587 1087 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm2316-201ENSMUST00000190613 921 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Ighv5-1-201ENSMUST00000193324 353 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm9523-201ENSMUST00000199146 1159 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm7812-201ENSMUST00000203479 874 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 AC166061.1-201ENSMUST00000225163 1138 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm6783-201ENSMUST00000120916 1437 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm12047-201ENSMUST00000117561 944 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm14571-201ENSMUST00000118292 570 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm8163-201ENSMUST00000122020 1060 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm22876-201ENSMUST00000175450 298 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm4430-202ENSMUST00000193902 1041 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC13.04□□□□□ -0.32
StrcQ8VIM6 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 AC161877.1-201ENSMUST00000227736 699 ntBASIC13.04□□□□□ -0.32
StrcQ8VIM6 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
StrcQ8VIM6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Gm23479-201ENSMUST00000158876 122 ntBASIC13.03□□□□□ -0.32
StrcQ8VIM6 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
StrcQ8VIM6 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
StrcQ8VIM6 AC123698.1-201ENSMUST00000227090 402 ntBASIC13.03□□□□□ -0.32
StrcQ8VIM6 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Gm42521-201ENSMUST00000199190 2040 ntBASIC13.03□□□□□ -0.32
StrcQ8VIM6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms