Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gm25148-201ENSMUST00000104611 123 ntBASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.61□□□□□ -0.71
Clrn1Q8K445 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gm23694-201ENSMUST00000179335 110 ntBASIC10.61□□□□□ -0.71
Clrn1Q8K445 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gm9132-201ENSMUST00000210182 832 ntBASIC10.61□□□□□ -0.71
Clrn1Q8K445 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gm37744-201ENSMUST00000194616 1590 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm21092-201ENSMUST00000178995 955 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Mir8115-201ENSMUST00000184992 119 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm18827-201ENSMUST00000188341 790 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm18753-201ENSMUST00000201000 566 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.6□□□□□ -0.71
Clrn1Q8K445 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clrn1Q8K445 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Clrn1Q8K445 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Clrn1Q8K445 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.59□□□□□ -0.71
Clrn1Q8K445 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.59□□□□□ -0.71
Clrn1Q8K445 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Clrn1Q8K445 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms