Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
ShfQ8CG80 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.02□□□□□ -0.81
ShfQ8CG80 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Gm7584-201ENSMUST00000175829 940 ntBASIC10.02□□□□□ -0.81
ShfQ8CG80 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Gm7741-201ENSMUST00000181445 989 ntBASIC10.02□□□□□ -0.81
ShfQ8CG80 Gm27441-201ENSMUST00000185000 105 ntBASIC10.02□□□□□ -0.81
ShfQ8CG80 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.02□□□□□ -0.81
ShfQ8CG80 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.02□□□□□ -0.81
ShfQ8CG80 Gm17825-201ENSMUST00000206836 794 ntBASIC10.02□□□□□ -0.81
ShfQ8CG80 Gm8385-201ENSMUST00000058999 643 ntBASIC10.02□□□□□ -0.81
ShfQ8CG80 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
ShfQ8CG80 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
ShfQ8CG80 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.01□□□□□ -0.81
ShfQ8CG80 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.01□□□□□ -0.81
ShfQ8CG80 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm24990-201ENSMUST00000157406 323 ntBASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm24844-201ENSMUST00000158679 127 ntBASIC10.01□□□□□ -0.81
ShfQ8CG80 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.01□□□□□ -0.81
ShfQ8CG80 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
ShfQ8CG80 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
ShfQ8CG80 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
ShfQ8CG80 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
ShfQ8CG80 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm38321-201ENSMUST00000195053 235 ntBASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm44506-201ENSMUST00000206278 965 ntBASIC10.01□□□□□ -0.81
ShfQ8CG80 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.01□□□□□ -0.81
ShfQ8CG80 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ShfQ8CG80 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
ShfQ8CG80 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
ShfQ8CG80 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ShfQ8CG80 Gm45041-201ENSMUST00000207366 3108 ntBASIC10□□□□□ -0.81
ShfQ8CG80 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms