Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm26013-201ENSMUST00000104404 119 ntBASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm11500-201ENSMUST00000118237 601 ntBASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm11836-201ENSMUST00000121022 441 ntBASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm3551-201ENSMUST00000190750 664 ntBASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps53Q8CCB4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm12628-201ENSMUST00000122193 382 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm28388-201ENSMUST00000186262 437 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm5298-201ENSMUST00000201122 892 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm42657-201ENSMUST00000201746 211 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm7940-201ENSMUST00000218195 769 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps53Q8CCB4 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Gm10731-201ENSMUST00000181171 448 ntBASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps53Q8CCB4 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.12□□□□□ -0.31
Vps53Q8CCB4 Gm44506-201ENSMUST00000206278 965 ntBASIC13.12□□□□□ -0.31
Vps53Q8CCB4 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms