Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm6019-201ENSMUST00000148369 736 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm24844-201ENSMUST00000158679 127 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm8459-201ENSMUST00000162504 760 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm43966-201ENSMUST00000203301 612 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm22920-201ENSMUST00000102175 109 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm22711-201ENSMUST00000116890 133 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm3329-201ENSMUST00000159873 556 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm9550-201ENSMUST00000161130 862 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Mir8115-201ENSMUST00000184992 119 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4Q8BQZ5 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cpsf4Q8BQZ5 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
Cpsf4Q8BQZ5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cpsf4Q8BQZ5 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cpsf4Q8BQZ5 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.9□□□□□ -0.67
Cpsf4Q8BQZ5 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cpsf4Q8BQZ5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cpsf4Q8BQZ5 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4Q8BQZ5 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4Q8BQZ5 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4Q8BQZ5 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 120.9 ms