Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Mir6387-201ENSMUST00000184042 108 ntBASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Mir1190-201ENSMUST00000116925 96 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm12028-201ENSMUST00000118065 436 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm27826-201ENSMUST00000175282 255 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm8643-201ENSMUST00000195228 625 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm45258-201ENSMUST00000210042 853 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm22495-201ENSMUST00000104492 126 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm16210-201ENSMUST00000122161 610 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Gm26174-201ENSMUST00000158415 219 ntBASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ttc28Q80XJ3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Gm9133-201ENSMUST00000118289 540 ntBASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC9.44□□□□□ -0.9
Ttc28Q80XJ3 Gm8226-201ENSMUST00000190511 798 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 143.1 ms