Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm25880-201ENSMUST00000104331 132 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm8111-201ENSMUST00000117659 987 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm12274-201ENSMUST00000120062 385 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm14395-201ENSMUST00000120494 563 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm12030-201ENSMUST00000121917 223 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm23694-201ENSMUST00000179335 110 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh8Q7TSK3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm14270-201ENSMUST00000118388 846 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm10169-201ENSMUST00000121822 348 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm25492-201ENSMUST00000157383 129 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm43163-201ENSMUST00000196571 442 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh8Q7TSK3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh8Q7TSK3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms