Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm24074-201ENSMUST00000158178 260 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm8815-201ENSMUST00000173809 620 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm27530-201ENSMUST00000184096 98 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Mir7677-201ENSMUST00000184226 67 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm27516-201ENSMUST00000184237 98 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm29615-201ENSMUST00000185371 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm28224-201ENSMUST00000186078 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm29001-201ENSMUST00000186177 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm28292-201ENSMUST00000186593 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm28101-201ENSMUST00000187608 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm29076-201ENSMUST00000187689 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm28302-201ENSMUST00000187931 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm28646-201ENSMUST00000188220 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm28205-201ENSMUST00000189177 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm29032-201ENSMUST00000189797 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm28695-201ENSMUST00000190300 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm37448-201ENSMUST00000192795 697 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm5302-201ENSMUST00000202130 796 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm45865-201ENSMUST00000211815 945 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scaf4Q6PFF0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Gm25148-201ENSMUST00000104611 123 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Gm38317-201ENSMUST00000195564 343 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Gm18038-201ENSMUST00000197900 485 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Gm32111-201ENSMUST00000207689 846 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Cts7-204ENSMUST00000225321 1257 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms