Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rad54bQ6PFE3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rad54bQ6PFE3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.33□□□□□ -0.59
Rad54bQ6PFE3 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm12218-201ENSMUST00000117666 399 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm24844-201ENSMUST00000158679 127 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm27441-201ENSMUST00000185000 105 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm45331-201ENSMUST00000209868 554 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.33□□□□□ -0.6
Rad54bQ6PFE3 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm22711-201ENSMUST00000116890 133 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm15595-201ENSMUST00000120840 961 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm19246-201ENSMUST00000173599 255 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm21778-201ENSMUST00000178779 471 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm5733-201ENSMUST00000190232 939 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm38321-201ENSMUST00000195053 235 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Gm44506-201ENSMUST00000206278 965 ntBASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rad54bQ6PFE3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms